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Permafrost degradation in peatlands is altering vegetation and soil properties and impacting net carbon storage. We studied four adjacent sites in Alaska with varied permafrost regimes, including a black spruce forest on a peat plateau with permafrost, two collapse scar bogs of different ages formed following thermokarst, and a rich fen without permafrost. Measurements included year‐round eddy covariance estimates of net carbon dioxide (CO₂), mid‐April to October methane (CH₄) emissions, and environmental variables. From 2011 to 2022, annual rainfall was above the historical average, snow water equivalent increased, and snow‐season duration shortened due to later snow return. Seasonally thawed active layer depths also increased. During this period, all ecosystems acted as slight annual sources of CO₂(13–59 g C m⁻² year⁻¹) and stronger sources of CH₄(11–14 g CH₄ m⁻²from ~April to October). The interannual variability of net ecosystem exchange was high, approximately ±100 g C m⁻² year⁻¹, or twice what has been previously reported across other boreal sites. Net CO₂release was positively related to increased summer rainfall and winter snow water equivalent and later snow return. Controls over CH₄emissions were related to increased soil moisture and inundation status. The dominant emitter of carbon was the rich fen, which, in addition to being a source of CO₂, was also the largest CH₄emitter. These results suggest that the future carbon‐source strength of boreal lowlands in Interior Alaska may be determined by the area occupied by minerotrophic fens, which are expected to become more abundant as permafrost thaw increases hydrologic connectivity. Since our measurements occur within close proximity of each other (≤1 km²), this study also has implications for the spatial scale and data used in benchmarking carbon cycle models and emphasizes the necessity of long‐term measurements to identify carbon cycle process changes in a warming climate.

 

Abstract. Peatlands have often been neglected in Earth system models (ESMs).Where they are included, they are usually represented via a separate, prescribed grid cell fraction that is given the physical characteristics of a peat (highly organic) soil. However, in reality soils vary on a spectrum between purely mineral soil (no organic material) and purely organicsoil, typically with an organic layer of variable thickness overlying mineral soil below. They are also dynamic, with organic layer thickness and its properties changing over time. Neither the spectrumof soil types nor their dynamic nature can be captured by current ESMs. Here we present a new version of an ESM land surface scheme (Joint UK Land Environment Simulator, JULES) where soil organic matter accumulation – and thus peatland formation, degradation and stability – is integratedin the vertically resolved soil carbon scheme. We also introduce the capacity to track soil carbon age as a function of depth in JULES and compare this to measured peat age–depth profiles. The new scheme is tested and evaluated at northern and temperate sites. This scheme simulates dynamic feedbacks between the soil organic material and its thermal and hydraulic characteristics. We show that draining the peatlands can lead to significant carbon loss, soil compaction and changes in peat properties. However, negative feedbacks can lead to the potential for peatlands to rewet themselves following drainage.These ecohydrological feedbacks can also lead to peatlands maintaining themselves in climates where peat formation would not otherwise initiate in the model, i.e. displaying some degree of resilience. The new model produces similar results to the original model for mineral soils and realistic profiles of soil organic carbon for peatlands.We evaluate the model against typical peat profiles based on 216 northern and temperate sites from a global dataset of peat cores.The root-mean-squared error (RMSE) in the soil carbon profile is reduced by 35 %–80 % in the best-performing JULES-Peat simulationscompared with the standard JULES configuration. The RMSE in these JULES-Peat simulations is 7.7–16.7 kg C m−3 depending on climate zone, which is considerably smaller than the soil carbon itself (around 30–60 kg C m−3). The RMSE at mineral soil sites is also reducedin JULES-Peat compared with the original JULES configuration (reduced by ∼ 30 %–50 %). Thus, JULES-Peat can be used as a complete scheme that simulates both organic and mineral soils. It does not requireany additional input data and introduces minimal additional variables to the model. This provides a new approach for improving the simulation of organic and peatland soils andassociated carbon-cycle feedbacks in ESMs. 

Abstract. In the global methane budget, the largest natural sourceis attributed to wetlands, which encompass all ecosystems composed ofwaterlogged or inundated ground, capable of methane production. Among them,northern peatlands that store large amounts of soil organic carbon have beenfunctioning, since the end of the last glaciation period, as long-termsources of methane (CH4) and are one of the most significant methanesources among wetlands. To reduce uncertainty of quantifying methane flux in theglobal methane budget, it is of significance to understand the underlyingprocesses for methane production and fluxes in northern peatlands. A methanemodel that features methane production and transport by plants, ebullitionprocess and diffusion in soil, oxidation to CO2, and CH4 fluxes tothe atmosphere has been embedded in the ORCHIDEE-PEAT land surface modelthat includes an explicit representation of northern peatlands.ORCHIDEE-PCH4 was calibrated and evaluated on 14 peatland sites distributedon both the Eurasian and American continents in the northern boreal andtemperate regions. Data assimilation approaches were employed to optimizedparameters at each site and at all sites simultaneously. Results show thatmethanogenesis is sensitive to temperature and substrate availability overthe top 75 cm of soil depth. Methane emissions estimated using single siteoptimization (SSO) of model parameters are underestimated by 9 g CH4 m−2 yr−1 on average (i.e., 50 % higher than the site average ofyearly methane emissions). While using the multi-site optimization (MSO),methane emissions are overestimated by 5 g CH4 m−2 yr−1 onaverage across all investigated sites (i.e., 37 % lower than the siteaverage of yearly methane emissions). 

Abstract Despite the importance of high-latitude surface energy budgets (SEBs) for land-climate interactions in the rapidly changing Arctic, uncertainties in their prediction persist. Here, we harmonize SEB observations across a network of vegetated and glaciated sites at circumpolar scale (1994–2021). Our variance-partitioning analysis identifies vegetation type as an important predictor for SEB-components during Arctic summer (June-August), compared to other SEB-drivers including climate, latitude and permafrost characteristics. Differences among vegetation types can be of similar magnitude as between vegetation and glacier surfaces and are especially high for summer sensible and latent heat fluxes. The timing of SEB-flux summer-regimes (when daily mean values exceed 0 Wm −2 ) relative to snow-free and -onset dates varies substantially depending on vegetation type, implying vegetation controls on snow-cover and SEB-flux seasonality. Our results indicate complex shifts in surface energy fluxes with land-cover transitions and a lengthening summer season, and highlight the potential for improving future Earth system models via a refined representation of Arctic vegetation types. 

Abstract. Past efforts to synthesize and quantify the magnitude and change in carbon dioxide (CO2) fluxes in terrestrial ecosystems across the rapidly warming Arctic–boreal zone (ABZ) have provided valuable information but were limited in their geographical and temporal coverage. Furthermore, these efforts have been based on data aggregated over varying time periods, often with only minimal site ancillary data, thus limiting their potential to be used in large-scale carbon budget assessments. To bridge these gaps, we developed a standardized monthly database of Arctic–boreal CO2 fluxes (ABCflux) that aggregates in situ measurements of terrestrial net ecosystem CO2 exchange and its derived partitioned component fluxes: gross primary productivity and ecosystem respiration. The data span from 1989 to 2020 with over 70 supporting variables that describe key site conditions (e.g., vegetation and disturbance type), micrometeorological and environmental measurements (e.g., air and soil temperatures), and flux measurement techniques. Here, we describe these variables, the spatial and temporal distribution of observations, the main strengths and limitations of the database, and the potential research opportunities it enables. In total, ABCflux includes 244 sites and 6309 monthly observations; 136 sites and 2217 monthly observations represent tundra, and 108 sites and 4092 observations represent the boreal biome. The database includes fluxes estimated with chamber (19 % of the monthly observations), snow diffusion (3 %) and eddy covariance (78 %) techniques. The largest number of observations were collected during the climatological summer (June–August; 32 %), and fewer observations were available for autumn (September–October; 25 %), winter (December–February; 18 %), and spring (March–May; 25 %). ABCflux can be used in a wide array of empirical, remote sensing and modeling studies to improve understanding of the regional and temporal variability in CO2 fluxes and to better estimate the terrestrial ABZ CO2 budget. ABCflux is openly and freely available online (Virkkala et al., 2021b, https://doi.org/10.3334/ORNLDAAC/1934).